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         Genome Databases & Maps Agric:     more detail

1. Newsltr24
Pig genome Update No. 24 May 1, 1997 We in the entire U.S. animal genome community owe Dr. Neal Jorgensen a big debt of thanks! Ms. Jenny Hergenrother, College of agric. and Life maps of chromosomes; and Objective 3 Expand the development and usage of internationally shared species genome databases
http://www.genome.iastate.edu/newsletter/nl24.html
Pig Genome Update No. 24
May 1, 1997
We in the entire U.S. animal genome community owe Dr. Neal Jorgensen a big debt of thanks! Neal, more than anyone in the Experiment Stations, helped to develop and shape the National Animal Genome Program which led to the NRSP-8. During his tenure as the lead administrative advisor Neal has helped to organize scientists, plan the program, secure funding for all of the collaborative and cooperative efforts and to defend NRSP-8 from those that who have liked to eliminate it. Neal is retiring from the University of Wisconsin this year where he has been a valued faculty member and administrator for the past 29 years. A reception in his honor will be May 28 and as part of the retirement there will be a gift of a book of letters. Please consider sending Neal a letter of thanks for his efforts. The letters should be unfolded and sent to Ms. Jenny Hergenrother, College of Agric. and Life Sciences, 140 Ag Hall, 1450 Linden Drive, Madison, WI 53706 by no later than May 19. Thanks to some great ideas there will be additional resources to share in 1997.

2. Bajwa & Kogan, IPM Informatics And Decision Support
day products (calculators, phenology models, maps, and map Ask an Expert http//www1.agric.gov.ab.ca ofthese resources include genome databases for several
http://ipmworld.umn.edu/chapters/Bajwa.htm
Internet-based IPM Informatics and Decision Support
Waheed I. Bajwa and Marcos Kogan
Integrated Plant Protection Center (IPPC)
Oregon State University, Corvallis, OR 97331
Apunte aquí para versión en Español X Introduction Knowledge and information are key to correct pest management decisions. Integrated pest management (IPM), a system that emphasizes appropriate decision making, is information intensive and depends heavily on accurate and timely information for field implementation by practitioners (Bajwa and Kogan 2000). Additionally, it is critical to strengthen the communication links between researchers and extension professionals and their clientele to expedite multi-way exchange of information and technology transfer. In addition, researchers and extension specialists need the most up-to-date information to design new projects and set future research goals and directions. There is already a large volume of useful IPM information available on the Internet, however, the information is scattered all across the globe. These resources range from topics such as pest identification, biology, control tactics, IPM definitions and basic concepts, to modeling and systems analysis. As awareness of the Internet increases worldwide, more people are participating not only as users of the information but also as creators of new information; as a consequence, the number of both IPM Internet servers and clients is increasing rapidly, perhaps slightly lagging but generally accompanying the exponential growth of the internet itself.

3. Nat'l Academies Press, The National Plant Genome Initiative: (2002), 3 Maximizin
Return from Reference Sequencing Translational agric?~If?vre We Physical maps canbe assembled from end information can be readily shared via genome databases.
http://www.nap.edu/books/0309085217/html/23.html
The National Plant Genome Initiative: Objectives for 2003-2008
Board on Life Sciences ( BLS ), Board on Agriculture and Natural Resources ( BANR
Related Books

CHAPTER SELECTOR:
Openbook Linked Table of Contents Front Matter, pp. i-xvi Executive Summary, pp. 1-8 1 Introduction, pp. 9-14 2 Sequencing: Generating the Raw Material, pp. 15-22 3 Maximizing the Return from Reference Sequencing: Translati..., pp. 23-30 4 Functional Exploitation of Genome Sequences, pp. 31-36 5 Genomics and the Major Transitions in Plant Evolution, pp. 37-40 6 Development of a National Strategy for Plant Bioinformatic..., pp. 41-50 7 Achieving Interdisciplinary Training, pp. 51-52 References, pp. 53-54 Appendix A: June 6-7, 2002 Workshop Agenda, pp. 55-58 Appendix B: Committee Biographies, pp. 59-64 Appendix C: Number of Publications in 2000-01 of 50 Most Cu..., pp. 65-68 Glossary, pp. 69-76
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CHAPTER PAGE PURCHASE OPTIONS PAPERBACK NEW! Purchase PDFs PAPERBACK + PDF BEST VALUE PDF BOOK THIS CHAPTER FREE with purchase of other chapters This book is also available in: HTML EXECUTIVE SUMMARY You may want to explore these Related Books CHAPTER SELECTOR: Openbook Linked Table of Contents Front Matter, pp. i-xvi

4. Agriculture Links - Internet Links - Find
Livestock Animal genome, Other Organism genome, Plant Reference The databases canbe browsed or queried. events, plants in the Gardens, maps and information for
http://www.slnsw.gov.au/links/agric.cfm
Where you are: State Library of NSW Find Internet links Internet links ...
New links

Search
Internet links
Advanced
Guide
Agriculture links
Australian, International, Horticulture Agriculture - Australian
  • ABARE - Australian Bureau of Agricultural and Resource Economics ABARE is an independent research agency which provides economic forecasts on Australian rural and resource industries. Subjects covered include commodity forecasts, services and infrastructure in the rural sector and risk management in farm businesses. AgNet - Australian Agriculture Index This site provides links to agricultural organisations and businesses. Agrigate This site is a gateway for online and offline resources for agricultural research. Information resources are selected by a committee of specialist librarians and members of the agriculture research community. Agrigate is a project of the libraries of the Universities of Melbourne, Adelaide and Queensland and the CSIRO. Department of Natural Resources Queensland Online - Factsheets This site provides access to fact sheets relating to land, pests, vegetation, water, and rivers. These files are in PDF format and require Adobe Acrobat Reader. National Farmer's Federation Australia This site provides links to news and weather, commodity prices and markets, as well as technical and government information.

5. Agriculture
Tutorial This is a 12lesson tutorial designed for new users of plant genome databases.The databases included information about genetic maps, molecular markers
http://www.mlb.ilstu.edu/ressubj/subject/agric.htm
Agriculture
Statistical Sources
Associations and Organizations

Databases and Directories

Agricultural Plants
...
Statistical Sources
  • Agriculture Fact Book 2000

  • The Agriculture Fact Book provides information about U.S. agriculture, USDA programs, food safety, nutrition, rural issues, research, education, and natural resources.

6. Plant Genome II Abstracts
INTEGRATION OF MULTIPLE RFLP maps AND MORPHOLOGICAL VA 240610404; 2 BiotechnologyCenter, Huazhong agric. Ames, IA 50011 DENDROME genome databases FOR FOREST
http://www.intl-pag.org/2/

7. Home Page For The Science & Technology Division
Forestry database program, Dendrome (Forest tree genome database) The feature, directory,news, conservation, publications,software, databases, maps and links
http://www.vpl.vancouver.bc.ca/branches/LibrarySquare/tec/agric.html
Vancouver Public Library Online Home Kids Teens ... Consumer Health Links
Agriculture and Forestry

Gardening

B.C. Ministry of Agriculture ,Food and Fisheries Home Page

Links to Canadian agricultural sites, a list of related B.C. associations and information on a variety of food and animal crops grown or raised on B.C. farms. B.C. Ministry of Forests Home Page
Gives accesss to a variety of resources including, The National Forestry database program, Dendrome (Forest tree genome database) The Tree Book (detailed information and illustrations about all varieties of trees in B.C.)Forest Practices Code guidebooks and much more Canadian Forest Service: Pacific Forestry Centre
The CFS promotes the sustainable development of Canada's forests and competiveness of the Canadian Forest sector. The site includes access to links about Mushrooms of the Pacific Northwest and The Mountain Pine Beetle The Canadian Model Forest Network
A model forest acts as a giant, hands-on laboratory in which leading edge techniques are researched, developed ,applied and monitored. Learn about approaches to sustainable forest management City Farmer's Urban Agriculture Notes
Vancouver-based site that provides information on urban agriculture, including composting and community gardening

8. UCL: Agriculture - Library Resources
Library databases. Plant genome Central Gene maps primarily for agriculturallyimportant crops, and links to other resources
http://www.lib.uconn.edu/subjectareas/agric.htm
Resources for Agriculture See also Animal Science Plant Science , and Natural Resources Contents:
University of Connecticut Library Collections and Services:
to return to Table of Contents
Library Databases
  • AGRICOLA via Silver Platter
    Covers all aspects of agriculture and allied disciplines, including animal and veterinary sciences, entomology, plant sciences, forestry, aquaculture and fisheries, farming and farming systems, agricultural economics, extension and education, food and human nutrition, and earth and environmental sciences. From 15th Century on.
  • AGRICOLA via National Agricultural Library
    See above
  • AGRIS International
    Covers general agriculture, extension, administration and legislation, economics, development, and rural sociology, plant production, forestry, animal production, aquatic sciences and fisheries, machinery and buildings, natural resources, food science, home economics, human nutrition, and pollution. International coverage. From 1975 on.

9. GENETICS-IB SYLLABUS Reference Links
Analyze cross over value (COV) data to construct gene maps of up (Advanced Option)ThePlant genome databases A Tutorial (US Dept of agric) http//www
http://www.uwc.ca/pearson/biology/syllabus/genetics.htm
Topics 3 and 10 - Genetics Introduction: This develops the principles of topic 3 to include more detail of meiosis, crossing-over and dihybrid crosses. As with topic 3, much can be learned by solving genetic problems and here there is the additional skill of statistical analysis using the chi-squared test.
    Teachers may wish to introduce the topic by referring to Brno (Czech Republic) and the historical origins of the science of Genetics in the work of Mendel (3.3.5 - 3.3.6).
Reference on Mendel Introduction
http://www.sonic.net/~nbs/projects/anthro201/ Mendelweb
http://www.stg.brown.edu/webs/MendelWeb/
Ref Link: The Story of Mendel and Interactive Pea Experiment

http://www.sonic.net/~nbs/projects/anthro201/
Mendelian Genetics
http://www.biology.arizona.edu/mendelian_genetics/mendelian_genetics.html
Human Genetics references
http://www.people.virginia.edu/~rjh9u/hgenes.html
UNDERSTANDING HEREDITY (NOVA)
http://www.pbs.org/wgbh/nova/genome/heredity.html
(GENERAL)Biology Website references
http://www.hoflink.com/~house/MendelGen.html
    Another way is to start with examples of modern genetics in human health, plant breeding and animal husbandry. The topic allows for the teaching of the principles of genetics including the relationship between genes and alleles and chromosome movement. The classical techniques of solving genetics problems can be covered in 3.4.10 and 3.4.11.
3.1.5 Define gene.

10. Impact Of The Internet On Entomology Teaching And Research
In addition to chromosomal DNA base sequences, it includes cytological maps, genes,structure and function of Insect germplasm and genome databases. J. agric.
http://csssrvr.entnem.ufl.edu/~walker/epub/ZengerARE.htm
IMPACT OF THE INTERNET ON ENTOMOLOGY TEACHING AND RESEARCH J. T. Zenger, T. J. Walker
Entomology and Nematology Department, University of Florida Editorial Department, Annual Reviews, Inc., Palo Alto, California 94303, cmcgeever@annurev.org KEY WORDS: World Wide Web, distance education, computer software, Web sites, electronic publications Shortened Title: INTERNET IMPACT TEACHING AND RESEARCH Send Proofs to: J. T. Zenger
Entomology and Nematology Dept.
Building 970, Natural Area Drive
PO Box 110620
Gainesville, FL 32611-0620
Phone: 352-392-1901 ext. 141
Fax: 352-392-0190
e-mail: zenger@gnv.ifas.ufl.edu Abstract THE IMPACT OF THE INTERNET ON ENTOMOLOGY TEACHING AND RESEARCH The Internet is relatively new and yet is entering our lives at an extraordinary rate. Because it is new, the Internet’s ultimate impact is not yet determined and cannot be foreseen. However, because the Internet’s effect on the field of entomology is already great it is important to chronicle its adoption into the areas of teaching and research to 1. alert entomologists to the changes that have occurred, and 2. take advantage of the resources that are now available. This will be done by briefly reviewing the history and current components of the Internet, and then separately addressing the topics of teaching and research. BRIEF HISTORY OF THE INTERNET The network that became the Internet began in 1969 as a U.S. Department of Defense project to develop a communication network that would survive a nuclear attack. Initially four universities were connected, a dozen or so in 1971 and eventually many sites were online. Scientists and researchers could now transfer files, hold online discussions and send e-mail between universities, companies and government agencies. The Internet as now defined was born in 1983, when a universal protocol was adopted and all research and government networks were connected (

11. Teacher Resource Center
food and rural development URLhttp//www.agric.gov.ab genome Database AnnotationOffers bovine gene maps and other cattle genome databases and resources
http://www.glc.k12.ga.us/trc/cluster.asp?mode=browse&intPathID=2976

12. World Species List - Non US Servers Hosting Species Lists Databases
Australian Catalogue of Taxonomic databases (in prep) DOWNLOAD Australia Western Australia, AU agric.wa.gov.au. animals and animals occurrence data maps and models list Australia
http://species.enviroweb.org/oxhnus.html
Add url - Email WSL World Species List Home Envirolink
World Species List - Non US Servers Hosting Species Lists
Items in this list: 863
Note: Some categories have url items that last for a very short time (i.e. "Species For Sale"). Sorted by server name without any www. Format is as follows: WHAT species list group (animals, conifers, bacteria, fossils, etc.)?
WHY_ nature of list (checklist, collection, sales, book index, etc)?
WHERE_ list target (Amazon, Ohio, world, Canada, fossil site, etc.)?
WHO_ originator or inheritor of list (WSL is not the owner)?
WHEN (not yet)
ho(W)_ (not yet)
  • plants cycads,Encephalartos list South Africa and tropical Africa Cycad Society of South Africa, ZA Cycad Society of South Africa: Species List
  • fossils animals ... marine,invert,sponges list Canada www.interchg.ubc.ca interchg.ubc.ca ubc
    #VALUE! plants The voyage of HMS Endeavour (1768-1771) images of illustrations Tierra del Fuego(Argentina) southern hemisphere The Natural History Museum, UK SEARCH internt.nhm.ac.uk nhm
    #VALUE!
  • 13. New Plant Genome Gopher
    THE PLANT genome DATA AND INFORMATION CENTER the Plant genome databases, the USDA Plant genome Competitive Grants, Title National agric. Library Electronic Information
    http://www.ibiblio.org/london/agriculture/links/1/msg00274.html
    [Prev] [Next] [Index] [Thread]
    New Plant Genome Gopher
    • Subject : New Plant Genome Gopher From akalinsk@nalusda.gov Date : 4 Apr 1995 21:31:10 GMT Article : 112 of bionet.biology.grasses Newsgroups bionet.biology.grasses Organization : National Agricultural Library
    gopher://gopher.nalusda.gov:70/11/infocntr/pltgen ftp://cliff.nalusda.gov//pub/elec.init/eii-rpt.txt

    14. GREP Annual Report 2000
    SAT CROP IMPROVEMENT THROUGH APPLIED GENOMICS Output 1 Develop appropriate DNA marker technologies, improved biometric and bioinformatic tools 1.1 DNA TECHNOLOGY ACTIVITIES Construct genetic linkage maps with QTL for complex traits not the creation of ICRISAT marker databases for all crops to subtribe Stylosanthinae. The genome specificity of 39 SSR
    http://www.icrisat.org/text/research/grep/annrep/p6.htm

    15. Research Sources
    org Biology = Genecards Human genes, maps, proteins number of important geneticsrelated databases and datasets http//genomewww.stanford.edu/ Biology = Jeff
    http://research.centenary.edu/biology.html
    Blackboard
    Moxie
    CHEMISTRY NEUROSCIENCE ... REFERENCE Biology = A TOP SITE = Annals of Botany.
    http://aob.oupjournals.org/ Biology = A TOP SITE = BasicBIOSIS: Basic information about biology and other life sciences; 370 titles; 1994 - present (agriculture, biochemistry, biology, biotechnology, botany, ecology, environment, genetics, medicine, microbiology, neuroscience, nutrition, physiology, public health) Full FirstSearch. http://firstsearch.oclc.org [Needs special passwords for access/ use only in library] Biology = TOP SITE TRIAL = BioOne 45 Full-Text high-impact bioscience research journals. Provides integrated, interrelated journals on biology, ecological and environmental sciences. http://www.bioone.org Biology = A TOP SITE = Journal of Heredity. http://jhered.oupjournals.org/ Gives full access to 7100+ articles 115,000 dictionary terms

    16. Rice Genome Newsletter (Volume 3, Issue 1, July 1994)
    for studying metabolic pathways and expression maps was presented model plant forall cereal genome mapping and Bigwood on integration of databases, ACeDB and
    http://rgp.dna.affrc.go.jp/rgp/ricegenomenewslet/nl5.html
    RICE GENOME (Volume 3, Issue 1, July 1994)
    Put to HTLM by Ilkka Havukkala. Cover page: ISSN 0918-4341
    Rice Genome
    Newsletter for Rice Genome Analysis Volume 3, Number 1 July 1994
    Cover page picture

    Rice Genome Research Program (RGP) Inside front cover: Announcement This is the fifth issue of the newsletter for the Rice Genome Research Program in NIAR/STAFF. The next issue will be published in December 1994. Editorial members Editor-in-chief: T. Sasaki Editors: N. Kurata, A. Miyao, Y. Nagamura, M. Yano Assistant Editors: I. Ashikawa, Y. Harushima, Y. Katayose, J. Song, Y. Umehara Technical editing and English: I. Havukkala Advisor: K. Kobayashi All correspondence should be addressed to: Editorial Office of Rice Genome Rice Genome Research Program 446-1, Ippaizuka Kamiyokoba Tsukuba Ibaraki 305 Japan Fax: +81-298-38-2245 or +81-298-38-2302 email: ilkka@staff.or.jp Cover page: Colony hybridization image of YAC high density filters using DNA marker R845 located on chromosome 6. Five filters containing about 7000 clones were used for YAC screening. The signals were detected with the ECL system. Rice Genome Research Program (RGP) is a part of the Genome Research Program of the Ministry of Agriculture, Forestry and Fisheries of Japan (MAFF).

    17. Rice Genome Newsletter (Volume 3, Issue 2, December 1994)
    utilized for screening these libraries for construction of physical maps. rice cDNAsare available in the public databases, the rice genome mapping effort
    http://rgp.dna.affrc.go.jp/rgp/ricegenomenewslet/nl6.html
    RICE GENOME (Volume 3, Issue 2, December 1994)
    Put to HTLM by Ilkka Havukkala. Cover page: ISSN 0918-4341
    Rice Genome
    Newsletter for Rice Genome Analysis Volume 3, Number 2 December 1994
    Cover page picture

    Rice Genome Research Program (RGP) Inside front cover: Announcement This is the sixth issue of the newsletter for the Rice Genome Research Program in NIAR/STAFF. The next issue will be published in summer 1995. Editorial members Editor-in-chief: T. Sasaki Editors: N. Kurata, A. Miyao, Y. Nagamura, M. Yano Assistant Editors: I. Ashikawa, Y. Harushima, Y. Katayose, J. Song, Y. Umehara Technical editing and English: I. Havukkala Advisor: K. Kobayashi All correspondence should be addressed to: Editorial Office of Rice Genome Rice Genome Research Program 446-1, Ippaizuka Kamiyokoba Tsukuba Ibaraki 305 Japan Fax: +81-298-38-2245 or +81-298-38-2302 email: ilkka@staff.or.jp Cover page: Synteny map of rice and wheat. Rice Genome Research Program (RGP) is a part of the Genome Research Program of the Ministry of Agriculture, Forestry and Fisheries of Japan (MAFF).

    18. AGRICULTURE
    The databases has a There are numerous reports, maps and links to look at here,including Library and the US Department of Agriculture Plant genome Program
    http://ces.iisc.ernet.in/hpg/cesmg/agricult.html
    AGRICULTURE
    Links To Interesting Sites In Agriculture
    Link to CES Homepage
    Link to ENVIS Homepage

    Back to MADHAV GADGIL's Homepage

    University of Wisconsin River Falls College of Agriculture

    The University of Wisconsin River Falls College of Agriculture page describes its facilities, academic departments, and degree programs.The departments focus on areas of agriculture that include biotechnology, agricultural economics, agricultural ...
    Purdue University School of Agriculture

    The Purdue University School of Agriculture WWW site presents the school's academic programs, which include an international agriculture program. In addition, this page describes its faculty, academic programs, research activities, and agricultural ...
    City Farmer's Urban Agriculture Notes

    This page has information and links to articles on urban agriculture. The page is provided by City Farmer, in Vancouver, British Columbia, Canada. Urban Agriculture Notes is written for those who want to start up their own 'Office of Urban ...
    GEARS - Global Entomology Agriculture Research Server

    GEARS, the Global Entomology Agriculture Research Server is an exciting new resource concerning the role that insectsoften beesplay in agriculture. There is a wide variety of information here geared to all types of people, including children, ...

    19. SUSTAINABLE AGRICULTURE
    The databases has a There are numerous reports, maps and links to lookat here, including Agricultural genome World Wide Web Server,
    http://ces.iisc.ernet.in/hpg/cesmg/tvrsusagri.html
    SUSTAINABLE AGRICULTURE
    Links To Interesting Sites In Sustainable Agriculture
    Link to CES Homepage
    Link to ENVIS Homepage

    Back to MADHAV GADGIL's Homepage

    Pesticide Information Service (PESTIS)

    The Pesticide Information Service (PESTIS) is an online database for the pesticide use reform and sustainable agriculture communities, made available onthe EcoNet computer network. This database has over 400 news items, action alerts, newsletter ...
    Communications for a Sustainable Future (CSF)

    The Communications for a Sustainable Future (CSF) supplies lists for the purpose of enhancing communications between cultures by using computer networking in order to secure a more promising future. The home page has archives listed in areas such as ...
    ABSP (Agricultural Biotechnology for Sustainable Productivity) Project

    The quarterly newsletter (Vol. 1 No. 4) for the ABSP (Agricultural Biotechnology for Sustainable Productivity) Project. This is the last issuefor 1994. It contains papers regarding environmental preservation through the exploitation of biotechnology ...
    BioLink Newsletter

    BioLink is the quarterly newsletter of the USAID-funded Agricultural Biotechnology for Sustainable Productivity (ABSP) Project. The newsletter covers topics such as Global Biotechnology Programs for the improvement and implementation of agricultural ...

    20. Cluster Structure FP 5
    7.5. Informatic tools for exploitation of genome data. comp. maps for. (+germaplasmcollections eg bot. gardens..; + genomic databases; + ind. or. agroind.
    http://www.amica-science.de/FPV/key.html
    We present here preliminary key points of the European Commission's Framework V Programme which are of interest for plant biotechnology in the "Quality of Life" programme (please note that the numbering of key points in the final programme might differ) AMICA offers cluster formation and coordination Key actions included in this table: 1.1. Development of safe, flexible and new/or improved manufacturing processes and technologies No.3: The "Cell Factory" 3.1. New and innovative health-related processes and products 4.1. New and/or improved systems of production and exploitation in agriculture, fisheries and aquaculture, including the 7.1. Contribution to the determination and interpretation of the sequence of the human genome and key genomes relevant Key action page headings key words Links to biol. raw material for high quality food -better adapt to processing, consumer requirements (enhanced nutritional or organoleptic properties) -plants to produce vaccines, therapeutics, diagnostics Technologies for biological productions -plant based production systems for pharmaceutical substances -therapeutics by recombinant gen. meth. in plants

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